PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020706022.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

bZIP

Protein Properties

Length: 542aa MW: 59411.4 Da PI: 6.6632

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020706022.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	32.7	1.7e-10	388	445	5	62
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 kr++r NR +A rs +RK +i eLe kv++L++e ++L +l l+ +a s+ XP_020706022.1 388 KRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSAGIASQ 445 9********************************************9999887766655 PP

Sequence ? help Back to Top
Protein Sequence Length: 542 aa Download sequence
MEEAEESRNG MMQTLKPSSS SSNFPSRLES TTGGRVFYRQ FPPTLIPDVS KRPGIPPVHP 60 LFTPTSLYPQ IPTPGGSAAP TSPANLNPLP SHCRSLSQPS FFSLDSLPSF TSSPFPDQAA 120 PTDVNMENCS AAAPLTQQTP LLPARRDHAV TEGIPPRKAH RRSQSDIPSA FLQSSNPMSG 180 LPPLPQHLQV TRESPPIGLV KRQTQFVKQE TECDREGDSD LKSEGDGGDD LINAYMNLDS 240 LDTLNSSGTE DKRDDLDSKA SGSKTNGAES SENEAESSMN EGVSRMVERK EGHKRSAVGD 300 PSPINIAPRH CRSLSMDSFM GRLNFGEELP KLPPSPGDRP GQHSHSGSMD GMSNTFSLEF 360 GNGEFTGAEM KKIMANEKLA EIAMSDPKRA KRILANRQSA ARSKERKMRY ISELEHKVQT 420 LQTEATTLSA QLTLLQRDSA GIASQNNHLK FRLQAMEQQA QLRDALNEAL SAEVHRLKLS 480 TGEPLSASLN HQIQLKPQML QLQQQLQKHH IHASQMALHP LQSPEKQEQK LNADASDTEM 540 NQ

Sequence ? help Back to Top

Protein Sequence Length: 542 aa Download sequence

MEEAEESRNG MMQTLKPSSS SSNFPSRLES TTGGRVFYRQ FPPTLIPDVS KRPGIPPVHP  60
LFTPTSLYPQ IPTPGGSAAP TSPANLNPLP SHCRSLSQPS FFSLDSLPSF TSSPFPDQAA  120
PTDVNMENCS AAAPLTQQTP LLPARRDHAV TEGIPPRKAH RRSQSDIPSA FLQSSNPMSG  180
LPPLPQHLQV TRESPPIGLV KRQTQFVKQE TECDREGDSD LKSEGDGGDD LINAYMNLDS  240
LDTLNSSGTE DKRDDLDSKA SGSKTNGAES SENEAESSMN EGVSRMVERK EGHKRSAVGD  300
PSPINIAPRH CRSLSMDSFM GRLNFGEELP KLPPSPGDRP GQHSHSGSMD GMSNTFSLEF  360
GNGEFTGAEM KKIMANEKLA EIAMSDPKRA KRILANRQSA ARSKERKMRY ISELEHKVQT  420
LQTEATTLSA QLTLLQRDSA GIASQNNHLK FRLQAMEQQA QLRDALNEAL SAEVHRLKLS  480
TGEPLSASLN HQIQLKPQML QLQQQLQKHH IHASQMALHP LQSPEKQEQK LNADASDTEM  540
NQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38900.3	1e-97	bZIP family protein