PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021273758.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

bZIP

Protein Properties

Length: 163aa MW: 18700.8 Da PI: 6.6339

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021273758.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	43.1	9.1e-14	32	90	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++ +rk +NRe+ArrsR RK++ ++ L+ v +L++ N + + ++ ++++ ++++e+ XP_021273758.1 32 RKRKRKLSNRESARRSRMRKQKHMDDLTGQVSQLTKDNNQIITSMNITTQLYLNVEAEN 90 5789***********************************99999888888887777766 PP

Sequence ? help Back to Top
Protein Sequence Length: 163 aa Download sequence
MATSSTGASS ASSTMMRSSS SDEDLQQILD ERKRKRKLSN RESARRSRMR KQKHMDDLTG 60 QVSQLTKDNN QIITSMNITT QLYLNVEAEN SVLRAQMTEL STRLQSLNEI IDFINLSNGV 120 FENDHNFEAA HHHHQINDDT FINPWTSFSV NQHFMASADM IMY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	31	38	ERKRKRKL
2	32	37	RKRKRK
3	32	53	RKRKRKLSNRESARRSRMRKQK
4	45	52	RRSRMRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G18160.1	8e-43	bZIP family protein