PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021273793.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ZF-HD
Protein Properties Length: 250aa    MW: 27789.9 Da    PI: 7.1613
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021273793.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer101.84.7e-3251105358
     ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 
                     k rY+eClkNhA  +GghavDGCgEfm++ g egt +alkCaAC+CHRnFHR+e+e
  XP_021273793.1  51 KPRYRECLKNHALGIGGHAVDGCGEFMAA-GVEGTLDALKCAACNCHRNFHRKEPE 105
                     779*************************9.999********************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MDFEDQEEQE EEMGLAPSYD SLANSSRVKM SGVEPGSITP TGQQQQQQQR KPRYRECLKN  60
HALGIGGHAV DGCGEFMAAG VEGTLDALKC AACNCHRNFH RKEPELGSPN SVPTTDLYLH  120
HHQPPQFAPY FRAPAGYLHL AGQQRPLALP STSGGGGGHS RDDQEDVSNQ GSSRKRFRTK  180
FTQEQKDKML GLAERLGWRI QKHDEAVVQQ FCNENGVKRH VLKVWMHNNK HTLDAVASSK  240
VETCNAMQEA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.13e-69ZF-HD family protein