PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021273853.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 209aa    MW: 24452.9 Da    PI: 5.0867
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021273853.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.73.3e-1993140152
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkk 52 
                     ++y+GVr+++ +g+W+AeIrdp    +r  r++lg+f+tae Aa+a+++a+  
  XP_021273853.1  93 THYRGVRQRP-WGKWAAEIRDP----IRaVRVWLGTFDTAEAAARAYDRAAVG 140
                     68********.**********7....358*********************965 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MENDNAGHPP ALTRAQEQQI MVSTLMHVIN GERPSLSVFA SSDNVFNFSD TYVPVQLNGN  60
HEYFDSIFPP SQQRHQQQQL PPRVPSNRRN NRTHYRGVRQ RPWGKWAAEI RDPIRAVRVW  120
LGTFDTAEAA ARAYDRAAVG FRGDKAKVNF PLSDYKKERE EEEEEEEKKK IPEEKDKSHE  180
EKGQTSKEND DEEWQIFSDE EFRELMMMD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.14e-23ERF family protein