PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021273919.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 181aa    MW: 20405.8 Da    PI: 10.1797
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021273919.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.92.2e-172372255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     ykG+r +k +g+WvAeIr+p   +kr r++lg++ t+  Aa+a++ a  +l+g
  XP_021273919.1 23 PYKGIRMRK-WGKWVAEIREP---NKRSRIWLGSYSTPVAAARAYDTAVFYLRG 72
                    59*****99.**********9...336*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    
MENGTGGGVV ATRESARKST ERPYKGIRMR KWGKWVAEIR EPNKRSRIWL GSYSTPVAAA  60
RAYDTAVFYL RGPSARLNFP DLLAGEKVGG GSLGGDMSAA SIRKKAIEVG ARVDALEAAQ  120
HHHHHHHHHH HHLHHGHNYN LNQNYNRSYA DELKPSGRLL QRVDLNKMPD PEDSDGEWER  180
K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67190.14e-67ERF family protein