PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021274079.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family WRKY
Protein Properties Length: 226aa    MW: 25510.8 Da    PI: 8.592
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021274079.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY102.52.4e-32149207159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK+vk++++prsYYrCt+ +C+vkk+ver aedp++v++tYeg+H h+
  XP_021274079.1 149 LDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHVHS 207
                     59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MSSTSQAMLN QGLFEEQEMP TQMGFFAFPP NLSCPAPLGC HPSLKAFSLE SADAPSAANL  60
TETLLSSATT AKHRDDPGSD FGGPQLLSLQ RSSANFWAWG EVNECLGSKK IGVDDHLGVS  120
AMKMKRIKAR RKVREPRFCF KTMSDVDVLD DGYKWRKYGQ KVVKNTQHPR SYYRCTQDNC  180
RVKKRVERLA EDPRMVITTY EGRHVHSPSH DLEDSQASSQ LNNFFW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39410.19e-53WRKY family protein