PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021274424.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

bZIP

Protein Properties

Length: 186aa MW: 21717.4 Da PI: 10.4315

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021274424.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	34.2	5.4e-11	78	123	5	50
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 ++ rr+++NRe+ArrsR RK++ +e+L++ v L eN++L ++l XP_021274424.1 78 RKRRRMISNRESARRSRMRKQKHLENLRNQVNRLRIENRELTNRLR 123 5789*************************************98875 PP

Sequence ? help Back to Top
Protein Sequence Length: 186 aa Download sequence
MMSTVPANFS PEPMLGNDLF PAFESGFTPW DCSELFSTTL STGPARSGSG SDEPNQNQTN 60 SNSGSDEPNQ PVSIVDERKR RRMISNRESA RRSRMRKQKH LENLRNQVNR LRIENRELTN 120 RLRFVLYHCH RVRTDNDRLR SEYSMLRQKF WDIRQILLFK QLQQFSSAWP CNNVTAMPEQ 180 TPPLIT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	78	82	RKRRR
2	78	99	RKRRRMISNRESARRSRMRKQK
3	91	98	RRSRMRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49760.1	4e-49	bZIP family protein