PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021274427.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family NAC
Protein Properties Length: 258aa    MW: 29431.5 Da    PI: 7.7255
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021274427.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1484.8e-46101381128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     l pGfrFhPt+eelv++yLk  + gk ++  ++i  ++iyk++PwdLp ++  +e+ewyfF++r++++ +g ++nr+t++gyWkatg+d+++ + 
  XP_021274427.1  10 LLPGFRFHPTEEELVDYYLKGTALGKIFHS-DIIGFLNIYKHNPWDLPGMAGIGEREWYFFVPRERRTGHGGKPNRTTETGYWKATGSDRHIRCP 103
                     579************************999.99***************8888899**************************************98 PP

             NAM  96 ..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                        ++ vgl+ktLvfy+g+apkg +tdWvm+eyrl
  XP_021274427.1 104 kePRKIVGLRKTLVFYTGKAPKGCRTDWVMNEYRL 138
                     655677***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MENVTPELAL LPGFRFHPTE EELVDYYLKG TALGKIFHSD IIGFLNIYKH NPWDLPGMAG  60
IGEREWYFFV PRERRTGHGG KPNRTTETGY WKATGSDRHI RCPKEPRKIV GLRKTLVFYT  120
GKAPKGCRTD WVMNEYRLIS NTTIATEDIV LAKIYRKATS LRVLEQRAEE LVRTSHQSLP  180
SNGAPQSNFD ALLSLQDLDF GAERGEELFE AAKKELHKEA NSESLMRVGS MPAAEPIMDW  240
TSESIWAHLR SPSSYAMW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.13e-82NAC family protein