PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021274490.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

G2-like

Protein Properties

Length: 86aa MW: 10043.8 Da PI: 11.484

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021274490.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	99.7	1.9e-31	21	74	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtpeLH++Fv+av+ LGG+ kAtPk+il++m+vkgL ++h+kSHLQ+YR+ XP_021274490.1 21 PRLRWTPELHQQFVQAVDWLGGKYKATPKRILQMMSVKGLKISHIKSHLQMYRS 74 8****************************************************7 PP
2	Myb_DNA-binding	52.7	9.6e-17	22	73	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e+++++v+av lGg+ t+k+I ++m kg+ ++ks++q+y+ XP_021274490.1 22 RLRWTPELHQQFVQAVDWLGGKykaTPKRILQMMSvKGLKISHIKSHLQMYR 73 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 86 aa Download sequence
MTKNSRRPGA GVRPYNKSDL PRLRWTPELH QQFVQAVDWL GGKYKATPKR ILQMMSVKGL 60 KISHIKSHLQ MYRSSKAETS VFRLYL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G14600.1	8e-32	G2-like family protein