PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021274901.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family NF-YB
Protein Properties Length: 199aa    MW: 20839 Da    PI: 7.1281
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021274901.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB1871.3e-5825120297
           NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 
                     reqdrflPianvsrimkk+lPanakiskdaketvqecvsefisf+t+easdkcqrekrktingddllwa++tlGfe+yveplk+yl+kyre+ege
  XP_021274901.1  25 REQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKIYLQKYREMEGE 119
                     89********************************************************************************************9 PP

           NF-YB  97 k 97 
                     k
  XP_021274901.1 120 K 120
                     7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
MADSHNESGG QNNSGGNAQS ETSAREQDRF LPIANVSRIM KKALPANAKI SKDAKETVQE  60
CVSEFISFIT GEASDKCQRE KRKTINGDDL LWAMTTLGFE EYVEPLKIYL QKYREMEGEK  120
TSMGRGEKDG ASGGSAGGAS GGGNGGSAGG GGVGSGGGGF NGGGGMYGGM MMMGHHQGHV  180
YGSGGFHHQM SAERWGRCR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.15e-68NF-YB family protein