PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021275933.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family bHLH
Protein Properties Length: 247aa    MW: 27958.8 Da    PI: 4.8243
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021275933.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.42.5e-1359101754
                     HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH   7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                       Er+RR+++N++++ Lr ++P+ +      K++Ka+i + A++YI++L
  XP_021275933.1  59 VSERNRRKKLNERLFALRAVVPNiS------KMDKASIIKDAIDYIQEL 101
                     57*********************66......****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MLAMENIENI GDEYKNYWET KYFLENEEYS SWAIDEFSGY YDSSSPDGAA SSAASKNIVS  60
ERNRRKKLNE RLFALRAVVP NISKMDKASI IKDAIDYIQE LHEQESRIQA EILELESGKL  120
KKNPGYEFDQ ELPVLLRSKK TKLENIFDSG GSRTSPIEVL ELKVTHMGEK TVVVSITCSK  180
RTDTMVKLCE VFESLKLKII TANITAVSGR LLKTVFIEAD EKEKDELKAQ IETAIAALND  240
PQSPMSM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.12e-81bHLH family protein