PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021276064.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

TALE

Protein Properties

Length: 171aa MW: 19596 Da PI: 5.8831

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021276064.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	24.2	5.6e-08	123	155	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +yp++e++++L +++gL+ +q+ +WF N+R + XP_021276064.1 123 WPYPTEEDKARLVQETGLQLKQINNWFINQRKR 155 69*****************************87 PP
2	ELK	30.4	8.4e-11	76	97	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+++++++++E++ XP_021276064.1 76 ELKHELKQGYKEKIVDIREEIL 97 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 171 aa Download sequence
MEAVMACWDL EQSLQSLTGV SPGEGSGATM SDDEDEVVDS ETSLFDGSLD GIDSMGFGPL 60 IPSETERSLM ERVRQELKHE LKQGYKEKIV DIREEILRKR RAGKLPGDTT SLLKAWWQSH 120 SKWPYPTEED KARLVQETGL QLKQINNWFI NQRKRNWQSN PSTSLKSKRK R

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	153	171	RKRNWQSNPSTSLKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G11060.1	1e-101	TALE family protein