PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021276134.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 261aa    MW: 28491.3 Da    PI: 4.6277
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021276134.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.82.8e-1868118155
             AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     + y+GVr +  +g+Wv+eIr+      k+ r++lg+f t+e+Aa+a++ a+++++g
  XP_021276134.1  68 PVYRGVRMRN-WGKWVSEIRExR----KKSRIWLGTFPTPEMAARAHDVAALSIKG 118
                     68*****998.**********33....36***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MTEPQNSETE SSSNSFSSPS LSPSSPGSTH SPPNSVPSST TTVNAKPXTT SSDSNXKIKR  60
MRDSSKHPVY RGVRMRNWGK WVSEIREXRK KSRIWLGTFP TPEMAARAHD VAALSIKGNS  120
AILNFPELAN SLPRPVSLAP RDVQAAAAKA AQMDKFDSPT PFTTSSXTLS SSSSXSSLVS  180
QMDLSSGSDE LSEIVELPSL ETSYDSVELK NEFVFVDSVD GWFYTPPWLQ SVDDCGYVCD  240
QLGVPESILQ NGFDEGLLWD Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.19e-68ERF family protein