PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021276621.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 200aa    MW: 22222 Da    PI: 7.6064
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021276621.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2612.8e-19555155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                    ++++GVr+++ +g+Wv+eIr+p        +r++lg+f taeeAa+a+++a+  + g
  XP_021276621.1  5 KKFRGVRQRH-WGSWVSEIRHP-----LlkRRVWLGTFETAEEAARAYDQAAILMSG 55
                    59*******9.**********8.....334*********************987765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MVQSKKFRGV RQRHWGSWVS EIRHPLLKRR VWLGTFETAE EAARAYDQAA ILMSGRNAKT  60
NFPISQTPSG DTKAGTENSH SSPPNDLSEL LHAKLRKCSK APSPSMTCLR LDTENSHIGV  120
WQKRAGQSSD ANWVMTVQLE KGNAEVSANT LPSKSPGLAG PELRGEMDEE ERIALQMIEE  180
LLHRNCSSID VQEGEGNLFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.12e-67ERF family protein