PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021276768.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 197aa    MW: 21775.2 Da    PI: 4.5715
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021276768.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2552e-171766255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++kGVr +k +g+Wv+eIr p++   r r++lg+++ ae+Aa+a +aa  +l+g
  XP_021276768.1 17 RFKGVRKRK-WGKWVSEIRLPNS---RERIWLGSYDNAEKAARAFDAALFCLRG 66
                    69****999.**********933...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
MVKNISDRPA AERSDLRFKG VRKRKWGKWV SEIRLPNSRE RIWLGSYDNA EKAARAFDAA  60
LFCLRGRSAK FNFPDNPPDI AGGRSLTPPE IQAAAARFAQ TEPPRTHSEQ STSGFQTESS  120
SPSISEGTVQ LDSELPMDGS FLDLLTMGSN NYASDYGIFP GFDDLASDFL GSSVPNIGFE  180
EDNIDGILVP ESFLWNF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11925KGVRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.11e-59ERF family protein