PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021276785.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family WRKY
Protein Properties Length: 260aa    MW: 28960.6 Da    PI: 8.7688
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021276785.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY89.52.8e-2898157159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     ++Dg++WrKYGqK+ k ++ pr+Y+rC+ a gCpvkkkv+r+ ed++++  tYeg+Hnh+
  XP_021276785.1  98 VKDGFQWRKYGQKVTKYNPSPRAYFRCSVApGCPVKKKVQRCVEDNSFLLATYEGQHNHD 157
                     58***************************99****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MDAPNSNEKK VEALQAEVEH LKRANEALRL MLEAMSSKCN MLEAYLRESS SQPTGSVLTR  60
IGSCDEYLNK RPRPEVPAME KASQVFVKTD PRDKSLIVKD GFQWRKYGQK VTKYNPSPRA  120
YFRCSVAPGC PVKKKVQRCV EDNSFLLATY EGQHNHDVQS SPKQSLSSTE SSAVLSTTSS  180
PYPVLNNSFR PTITLDLTLS GSNVENSWNP RNLMQETSCN DHDNKRIEDY VASLTKDPNF  240
TVALAAAVAR SINGLRPSTP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17074KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.19e-46WRKY family protein