PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021276831.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 149aa    MW: 16319.1 Da    PI: 9.145
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021276831.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.92.8e-191868155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++ykGVr +k +g+WvAe+r p++   r r++lg++ taeeAa+a++aa  +l+g
  XP_021276831.1 18 TRYKGVRMRK-WGKWVAEVRQPNS---RGRIWLGSYKTAEEAARAYDAAVFCLRG 68
                    68******99.*******999843...48************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    
MVRPGRGRDN GVNNNSNTRY KGVRMRKWGK WVAEVRQPNS RGRIWLGSYK TAEEAARAYD  60
AAVFCLRGSS GKLNFPDNPP DIADASELPP AQIQEAAFRH ARKVITEEKE VKEEMAAGGN  120
SYGECYFGGG SVGDGSGGTC YQSSGFWTF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.16e-29ERF family protein