PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021276867.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 234aa    MW: 25480.6 Da    PI: 4.6652
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021276867.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.31.8e-182575155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    s+ykGVr +k +g+Wv+eIr p++   r r++lg++++ae+Aa+a +aa  +l+g
  XP_021276867.1 25 SKYKGVRKRK-WGKWVSEIRLPNS---RERIWLGSYDSAEKAARAFDAALYCLRG 75
                    89*****999.**********933...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MVKPNCTASS TSPTEHVSDV TSSSSKYKGV RKRKWGKWVS EIRLPNSRER IWLGSYDSAE  60
KAARAFDAAL YCLRGRDAKF NFPENPPEIV GGRSLSPPEI QAVAARFANE VEADGTAGNH  120
NHINNINNSI IXSDGSHSRN NNVGTEQNTS SSSWSVSGWG TPAIQVESTE MMDYSSFLSM  180
LDTDQGMSDY GFCSGLLPGD PLYPPPLPSP PVDDNVDDQN GGEGFSQSSF LWNF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12834KGVRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.15e-51ERF family protein