PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021277752.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family GeBP
Protein Properties Length: 215aa    MW: 25051.9 Da    PI: 10.5534
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021277752.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57352.61.2e-1614104398
          DUF573   3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 
                     ++r++se+Dei +L+ l   +++     ++  ++ ++ + k+++ k++ sq+ +K+rrL+ K++k+ ++     +  ++++hd+ if+lsk+iWg
  XP_021277752.1  14 SSRVFSESDEIQILKCLFRATKSIPPPITAVGTRTINRIIKRLNYKFTPSQINDKLRRLRLKYHKHARN-----KSLVRTHHDRRIFKLSKRIWG 103
                     78***************766555554555567889999999*************************999.....6678999*************9 PP

          DUF573  98 s 98 
                     +
  XP_021277752.1 104 K 104
                     5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MATSPPSTTP NGRSSRVFSE SDEIQILKCL FRATKSIPPP ITAVGTRTIN RIIKRLNYKF  60
TPSQINDKLR RLRLKYHKHA RNKSLVRTHH DRRIFKLSKR IWGKKISATN NEKVEEETGS  120
GERNWVRNLE KFPYLVAEFS RVLPENEVWK ERMKGLEEEK LRQMDQEWIF IKVEEAKLVA  180
KKADLMQQQI MEILGETVSA NGVSFCSNLG QLEEL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61730.14e-10GeBP family protein