PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021279034.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family NAC
Protein Properties Length: 241aa    MW: 27594.9 Da    PI: 6.0574
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021279034.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM148.14.4e-4641342128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                     + GfrF Pt+eelv++yL++++egk+ e++ vi+ ++iy+vePwdLp+     +ka++++w++F++r++++a+g r++r+t+sgyWkatg+   v
  XP_021279034.1   4 ATGFRFFPTEEELVSFYLRNQLEGKRQEMHLVIPVLNIYDVEPWDLPQlageVCKADTEQWFYFTPRQEREARGGRPKRTTASGYWKATGSPSYV 98 
                     58***************************889**************9657765566888************************************ PP

             NAM  93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +s++++++g+kkt+vfykg+ap+g+kt+W m+eyr+
  XP_021279034.1  99 YSSDDQVIGMKKTMVFYKGKAPSGRKTKWKMNEYRA 134
                     **********************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MEVATGFRFF PTEEELVSFY LRNQLEGKRQ EMHLVIPVLN IYDVEPWDLP QLAGEVCKAD  60
TEQWFYFTPR QEREARGGRP KRTTASGYWK ATGSPSYVYS SDDQVIGMKK TMVFYKGKAP  120
SGRKTKWKMN EYRAIEAVAN PSAAATRKLR HEFSLCRVYV VSGSLRAFDR RPPETVPRGT  180
QLHDNTTTIS SERPTMEISS SGTSPSGGNH SDLQEASEDD IWDMVTDLEE HPLEWEQVKW  240
T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.13e-92NAC family protein