PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021279224.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 241aa    MW: 26791.2 Da    PI: 6.9286
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021279224.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.89.8e-1768117255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      ++GVr++  + +Wv+e+r+p   +k++r++lg++ t+e+Aa+a++ a+++++g
  XP_021279224.1  68 IFRGVRRRN-KDKWVCELREP---NKKTRIWLGTYPTPEMAARAHDVAALAFRG 117
                     59****888.7*********8...347************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MDISCQFSDL FSCKSYSMPA DRLEPSSSSE AGTVRRAVHS DEEVLLLATS RPKKRAGRRI  60
FKETRHPIFR GVRRRNKDKW VCELREPNKK TRIWLGTYPT PEMAARAHDV AALAFRGKAA  120
CLNFADSAWR LPVPASNDAV DIRRAAAEAA EAFRPQELDV LSSSDAKQES VKASDGEVSS  180
SAGNLGNSKI VSEKVHFLDE EAMFDMPKLL VSMAEGLLLS PPRNWDDSDS DIDVSLWSYS  240
I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25490.13e-66ERF family protein