PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021279247.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family C2H2
Protein Properties Length: 197aa    MW: 21656.8 Da    PI: 6.1186
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021279247.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.30.000122749123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C++ Fs+   L  H++ H
  XP_021279247.1 27 YECTFCKRGFSNAQALGGHMNIH 49
                    99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
METDQPAPEN PDQGSPDDQR TSPARSYECT FCKRGFSNAQ ALGGHMNIHR RDKAKLKQAS  60
SPGETTQQSL DIVPKIIPSS YSPNHPSCTT VLQPRADAKS SQEIRSSPGK WPWVIQGDDD  120
ADKRDKTHVG EIRQLPLFDE KPSTTDQNYP SSQVQGGIGK GISSSQWSSG SDQLDLELRL  180
GPEPQDSSPT MTTKKFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53820.19e-18C2H2 family protein