PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021279689.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 197aa    MW: 21328 Da    PI: 8.7331
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021279689.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.77e-19106155355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     y+GVr+++ +g+++AeIrdp++ g   r +lg++ t+e+Aa a+++a+ +++g
  XP_021279689.1 106 YRGVRRRP-WGKYAAEIRDPKKKG--VRLWLGTYKTPEDAALAYDKAAFEIRG 155
                     9*******.**********96643..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
MWGESTSASA SDHDLAVLDS ISEHLLADDF EASLKSSDFC RTFSFTSLPL NASTQPLKLD  60
SEFSSGCPAL SNPTDSPTAP EKAEVRPLKA SQGEAATAAC GKEVSYRGVR RRPWGKYAAE  120
IRDPKKKGVR LWLGTYKTPE DAALAYDKAA FEIRGSKAKL NFPHLIGSSN STEPVRVCPR  180
RRSPDTTSRK CGGAVFI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.11e-45ERF family protein