PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021280042.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

bZIP

Protein Properties

Length: 145aa MW: 16520.8 Da PI: 5.3293

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021280042.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	43.4	7.3e-14	24	78	5	59
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 ++ +r+ +NRe+ArrsR RK++++e L +v +L++ N++L ++++ ++ + ++ XP_021280042.1 24 RKRKRMLSNRESARRSRMRKQKQLEDLVSEVGTLQKDNSQLSENINVTTQRYIEM 78 57899***************************************99888776665 PP

Sequence ? help Back to Top
Protein Sequence Length: 145 aa Download sequence
MAPVQRPGSS GSDSDPRYAN IDERKRKRML SNRESARRSR MRKQKQLEDL VSEVGTLQKD 60 NSQLSENINV TTQRYIEMVS ANNVLRAQAV ELTDRLRSLN SVLHIVEEVS GLDVEIPEIP 120 DSLLEPWRLP CPIQPIMASV DMFEC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	24	45	RKRKRMLSNRESARRSRMRKQK
2	37	44	RRSRMRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G62420.1	1e-66	bZIP family protein