PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021280097.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family NF-YC
Protein Properties Length: 155aa    MW: 17415 Da    PI: 10.0684
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021280097.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC47.25e-15231041898
           NF-YC  18 nhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtd.ifdflvdivpr 98 
                     + e+P  r+kki+k d+d+++i +ea  ++s + +lf+  l+ rs   a e+k++t+k   + +av+r   + dfl+d  p 
  XP_021280097.1  23 RPEFPTGRVKKIMKLDKDINKINSEALFIVSCSTDLFLRFLAERSAEVATEKKKKTVKLEHLRTAVKRHRpTSDFLLDSLPM 104
                     6689**************************************************************9975489*****9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    
MCFSVPTPNV PSMAEDEAID PIRPEFPTGR VKKIMKLDKD INKINSEALF IVSCSTDLFL  60
RFLAERSAEV ATEKKKKTVK LEHLRTAVKR HRPTSDFLLD SLPMPAESTQ SVARTVTDRE  120
RSRPVADKPA AAGTRRIDHF FRKPGNEAPI QINDA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43250.13e-43NF-YC family protein