PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021280438.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 224aa    MW: 25327.2 Da    PI: 5.2127
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021280438.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2591.1e-1897146355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     y+GVr ++ +g+++AeIrd + ng   r++lg+f++ae Aa a+++a+ +++g
  XP_021280438.1  97 YRGVRKRP-WGKYAAEIRDSTRNG--VRVWLGTFDSAEAAALAYDQAAFSMRG 146
                     9*******.**********44465..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MNNLTPDMDS CFFQHSTPEF SPESSSGSPE PCSCWDDLLL HHNSIPFNFN DSEEMLWMDL  60
LAQGPKESSE SNSTDGLKEE EVTSDAKHEE PKKEKTYRGV RKRPWGKYAA EIRDSTRNGV  120
RVWLGTFDSA EAAALAYDQA AFSMRGSLAT LNFPIEVVRE SLQDIKYRCE EGCSPVVALK  180
KRHSLRKRSK NKKSKQNEAA RQQQNLVVLE DLGADYLEQL LSSC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1185193LRKRSKNKK
2187193KRSKNKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.17e-49ERF family protein