PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021280645.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family WRKY
Protein Properties Length: 218aa    MW: 24628 Da    PI: 4.624
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021280645.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY49.11.1e-1525652059
                    S-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY 20 fprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
                      r+YYrC+++ gC++kk+ver+++d ++++itY+++Hnh+
  XP_021280645.1 25 SCRGYYRCSTSkGCSAKKQVERCRTDASMLIITYTSSHNHP 65
                    579*****9988****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MSFSLHFVPS HLTPSRILTK FHVSSCRGYY RCSTSKGCSA KKQVERCRTD ASMLIITYTS  60
SHNHPGPDLH TTNLTQSPKE TQTDHSDDQY PTPKQQQLPE DPQQEEPEEV QNEPIKTSSD  120
EDASEEHFHY LQSPLSSPRN IIINQEDPFT GNLEKTHDTL GFLLDEEPLS CPHITTSSTP  180
KSEENDFFDE LEELPISSAF TSFMRSKISD EGINVVPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.12e-18WRKY family protein