PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021280657.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 191aa    MW: 21368.6 Da    PI: 6.3583
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021280657.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.39.4e-194090155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    + y+GVr ++ +g+Wv+eIr+p++   + r++lg+f  +e+Aaka++ a+ +l+g
  XP_021280657.1 40 PVYRGVRKRR-WGKWVSEIREPRK---KSRIWLGSFPVPEMAAKAYDVAAFCLRG 90
                    68*****887.**********843...6*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    
MEQPPYTEDD LNTSTTSPES TTTAETHPKH DSKRGGTRHP VYRGVRKRRW GKWVSEIREP  60
RKKSRIWLGS FPVPEMAAKA YDVAAFCLRG RKAQLNFPDE VEDLPRPSTC TARDIQAAAA  120
KAAHSVVSSK KSQESSEDGD GHGADDFWGE IELPELMNSG CQWNSRGWTF TGDGSWLEGE  180
AQQQQQFLAC L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01250.13e-63ERF family protein