PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021280744.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 234aa    MW: 26386.4 Da    PI: 5.0558
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021280744.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.46.3e-17102150253
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkl 53 
                      y+GVr ++ +g+++AeIrd +    +  r++lg+f++ae Aa a+++a+++ 
  XP_021280744.1 102 SYRGVRKRP-WGKYAAEIRDSTR---HgIRVWLGTFDSAEAAALAYDQAALST 150
                     69*******.**********422...25**********************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MISLSLQDMD SSFLESLNSE FLLESQQDLL ESFSPNNELF LDQDFLSFDI IDSKELPSQD  60
ATLCHHGSRE SSNSSCGLIV DEEHVVSSAK KREEQQPKEE KSYRGVRKRP WGKYAAEIRD  120
STRHGIRVWL GTFDSAEAAA LAYDQAALST QGPKAVLNFP VERVRESLRN MNYYCKDGAS  180
PAVELKQRNY VQRTSMARKN KKKQSQAKNV VVLEDLGSEY LEELLSSSQS TSSC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.12e-32ERF family protein