PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021280810.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family NF-YB
Protein Properties Length: 175aa    MW: 19791.1 Da    PI: 6.5227
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021280810.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB1711.3e-5331127197
           NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 
                     v+eqdr+lPianv+rimk++lP nakisk+aket+qecvsefisfvt+easdkc++ekrkt+ngdd++walatlGf++++e+lk yl++yr+ eg
  XP_021280810.1  31 VKEQDRLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICWALATLGFDNFAEQLKRYLHRYRDQEG 125
                     58********************************************************************************************9 PP

           NF-YB  96 ek 97 
                     e+
  XP_021280810.1 126 ER 127
                     97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    
MTDKIGIDSD REDHSYNFAG AGGVLGEDGI VKEQDRLLPI ANVGRIMKQI LPPNAKISKE  60
AKETMQECVS EFISFVTGEA SDKCHKEKRK TVNGDDICWA LATLGFDNFA EQLKRYLHRY  120
RDQEGERVNQ NRAGNHEEKE ETSNYRSELP RRSAVPSTPL KFNAIDRSSS LSRPF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47810.13e-63NF-YB family protein