PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021280838.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 139aa    MW: 15668.2 Da    PI: 7.6711
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021280838.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.81.5e-192273256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    +y+G+r+++ +g+++AeIrdp+ ng  +r +lg+f taeeAa+a+++a+ +++g+
  XP_021280838.1 22 RYRGIRRRP-WGKFAAEIRDPTRNG--ARLWLGTFETAEEAARAYDRAAFAFRGH 73
                    69*******.**********98887..*************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    
MEASHQGGKN TGNNGKGNTE VRYRGIRRRP WGKFAAEIRD PTRNGARLWL GTFETAEEAA  60
RAYDRAAFAF RGHSAILNFP NEYQYQNPTF PPSLASSSTY GVGRGNPPRG QGSEVIEFEY  120
LDDKLLEDLL ETQDDRQRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.18e-26ERF family protein