PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021281056.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family C2H2
Protein Properties Length: 182aa    MW: 20601.4 Da    PI: 5.5225
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021281056.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.70.000193254123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C  C++ F++   L  H++ H
  XP_021281056.1 32 YECVFCKRGFTTAQALGGHMNIH 54
                    99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    
MEANQLEDSK SSSEETDRSE QSNDNMGTGR SYECVFCKRG FTTAQALGGH MNIHRKDRAK  60
SRPSSVPIVS GKADENLNYA SLMSYSYPPI QSQQHYSMVP EVHVSYQAFF PASGWGFRPP  120
HTHHSDELYV DNSRHLNPFG EDWPRSLNLR IGPSRVEDEN KKTDGSSQED ELDLELRLGH  180
DP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17810.12e-17C2H2 family protein