PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021281233.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family C2H2
Protein Properties Length: 212aa    MW: 23930.4 Da    PI: 8.6415
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021281233.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.88.3e-055678123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C++ F++   L  H+++H
  XP_021281233.1 56 YTCSFCKREFRSAQALGGHMNVH 78
                    9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MVFLFLMLLE SIRKQQCSME KAYLTSNKNG KRDCNSSCLE GDHSCCCGLT WPPKHYTCSF  60
CKREFRSAQA LGGHMNVHRK DRARLRLLPS WAFECQNPEP NSIPNPNSSP VSLSSHSVNF  120
SLYPHHSLLS PLLSTPSSSP PPYRENLRKP LIPQLGGLSK EKTMSPFLGV EKLKRHAQKY  180
ELEVGGVTGV DSETEFKDSK EVLDLELRLG YF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42410.13e-24C2H2 family protein