PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021281366.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 237aa    MW: 26321.4 Da    PI: 5.3846
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021281366.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.34e-1859108255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr +  +g+Wv+eIr+p++   + r++lg+f tae+Aa+a++ a++ ++g
  XP_021281366.1  59 TYRGVRMRQ-WGKWVSEIREPRK---KSRIWLGTFPTAEMAARAHDVAALTIKG 108
                     69****998.**********843...6**********************99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MEVPLVAEFE TQSSASSSSS PLASESSTGF KSKKVGKLKN ANESKRKVKN DEVEGKHPTY  60
RGVRMRQWGK WVSEIREPRK KSRIWLGTFP TAEMAARAHD VAALTIKGKS AYLNFPEIAH  120
ELPRPVSAQP KDIQAAAAKA AALNYPKSHE VEAELSQVDQ MFPRSPASTV TSHDTQDSSS  180
SPLINNDDAF IDLPDLLLDM NHQIDEFWGS LSWQLPATDD PVDNGFGYEE PCLWEYC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35700.11e-57ERF family protein