PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021281939.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family NAC
Protein Properties Length: 128aa    MW: 14865.6 Da    PI: 5.9183
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021281939.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM54.53.9e-173311045122
             NAM  45 wdLpkkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWv 122
                     +d+  k+k+ + +e yfF+   ++y+t ++ + ++ksgyW+atg+++++ + ++e vg k+++vfy g+ap++++++W+
  XP_021281939.1  33 NDIACKFKHgKANEAYFFTVVPQAYSTAEQMEGSAKSGYWNATGETEQIDH-HNEIVGFKRIFVFYWGEAPTAKESSWI 110
                     455534444156699**********************************99.999***********************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 128 aa     Download sequence    
MGELLSLDFH GNLVPFRSCR WKMLNNLNST RHNDIACKFK HGKANEAYFF TVVPQAYSTA  60
EQMEGSAKSG YWNATGETEQ IDHHNEIVGF KRIFVFYWGE APTAKESSWI ERYALCRIID  120
KEHDEIED
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12260.11e-12NAC family protein