PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021281944.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family NAC
Protein Properties Length: 234aa    MW: 27613.1 Da    PI: 8.7972
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021281944.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM652.3e-2021611128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkk.....leleev.ikevdiykvePwdLpk...........kvkaeekewyfFskrdkkyatgk..rknr 76 
                     l pG+ F+Ptd e+v++yL + ++++          +  ++  d+y+ +P+ L +               + ++ +fFs+r+++++ +   +  r
  XP_021281944.1   2 LSPGYVFDPTDREIVSYYLPRLIASRGntgflG-NLRYfFNVRDVYSRKPSLLFEsnndgekkllpY--MKGNQRFFFSRRQRTSEMNAdhKIYR 93 
                     579*******************99999666632.333426777**********63356665554322..266799******99887433113333 PP

             NAM  77 a........tksgyWkatgkdkevlsk...kgelvglkktLvfy.....kgrapkgektdWvmheyrl 128
                                +g Wk t +++++++    k++  g  + L f+     ++++++  kt+W+m ey l
  XP_021281944.1  94 RtlqeegqgEPQGHWKRTSSTHPIFDDqndKKKILGYVNLLSFHeyqigEKNKKEDIKTNWIMYEYYL 161
                     235555544459*************98766666799*******97777657788889*********76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MLSPGYVFDP TDREIVSYYL PRLIASRGNT GFLGNLRYFF NVRDVYSRKP SLLFESNNDG  60
EKKLLPYMKG NQRFFFSRRQ RTSEMNADHK IYRRTLQEEG QGEPQGHWKR TSSTHPIFDD  120
QNDKKKILGY VNLLSFHEYQ IGEKNKKEDI KTNWIMYEYY LCQNRFQEWV ICKIKDKNRS  180
EEDECEPSLL RRLFSSKERA VADGSQPVPC QSSNLVKAPR DFDLNELPPD SPSP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63790.18e-09NAC family protein