PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021282250.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 170aa    MW: 18778 Da    PI: 5.3384
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021282250.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP245.61.7e-14352255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                     y+GVr++  +g+ vAeIr+p   + r  r +lg+f t  eAa a+++ ++kl+g
  XP_021282250.1  3 TYRGVRQRT-WGKCVAEIREP---N-RgNRLWLGTFNTSLEAALAYDEVARKLYG 52
                    69****999.**********8...2.359************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
MCTYRGVRQR TWGKCVAEIR EPNRGNRLWL GTFNTSLEAA LAYDEVARKL YGPSAKLNLP  60
QPHGFPSITS FPGNLVNSCK ETGMLGSPSV GESSGSSGSS IQSEERLVRR KINTEGFKGS  120
VSLGGDREED FYWLEFSLEN DFLKMNGIEV LIGQEFKGNW DGNEIAGMQS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.12e-33ERF family protein