PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021282291.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family GATA
Protein Properties Length: 171aa    MW: 18586.5 Da    PI: 10.9305
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021282291.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA61.78.8e-202660135
            GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                    C+ C+ttkTplWR gp g+k+LCnaCG++yrkk++
  XP_021282291.1 26 CTDCKTTKTPLWRGGPAGPKSLCNACGIRYRKKRR 60
                    ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MGVMDLREKK SLSEAVMMSE NNKKFCTDCK TTKTPLWRGG PAGPKSLCNA CGIRYRKKRR  60
AMLGLNKGAE KKKERSQSSH GSSTTTGTTS SASVATTNVG DKKPSRQLNG LSESVKMRLY  120
ALGSEVLLQR SSSSLLSGVV KKQRCQRRRK LGEEEQAAFS LMALSCGSVF A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.15e-17GATA family protein