PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021282573.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 225aa    MW: 25218.1 Da    PI: 4.5401
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021282573.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.49.7e-2092141355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     y+GVr+++ +g+++AeIrd + ng   r++lg+f+tae Aa a+++a+++++g
  XP_021282573.1  92 YRGVRRRP-WGKYAAEIRDSTRNG--VRVWLGTFDTAEAAALAYDQAALAMRG 141
                     9*******.**********44465..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MDSSYFQYPY SQFSPESSSS YVSQENLSLD SFNYPPSQAL PFNENDSQEM LLLGVLNQAP  60
ASSFDTASVN NSRDDEVSSK ANEEESTGKI SYRGVRRRPW GKYAAEIRDS TRNGVRVWLG  120
TFDTAEAAAL AYDQAALAMR GSLAILNFPM EKVYESLQEM NYGFEEGCSP VLTMKKRHSL  180
KGKKGMMKKV KKEKEVSTEN VVVLEDLGTD YLEELLSISE SSTLW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.16e-50ERF family protein