PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021282624.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family HSF
Protein Properties Length: 233aa    MW: 26790.2 Da    PI: 8.3092
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021282624.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind110.61.1e-34241152102
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl+k+y ++ed++ +++isw+++g+ fvv+++ efa+++Lp+ Fkhsnf+SFvRQLn+YgF+kv +++         weF ++ F+kg++ell++
  XP_021282624.1  24 FLMKTYMLVEDPTSDDVISWNADGTGFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVATSR---------WEFCNEMFRKGDRELLCN 109
                     9****************************************************************999.........****************** PP

                     XXXXXX CS
    HSF_DNA-bind  97 ikrkks 102
                     i+r+k 
  XP_021282624.1 110 IRRRKA 115
                     ***985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MEPMASDSNK GLLDYVRKST PPPFLMKTYM LVEDPTSDDV ISWNADGTGF VVWQPAEFAR  60
DLLPTLFKHS NFSSFVRQLN TYGFRKVATS RWEFCNEMFR KGDRELLCNI RRRKAWANKQ  120
QTAATIQVSP QESDEDQRSS STSSSSGHNS LVDENKRLKE ENGVLSLELT SMKRKCKELL  180
DLVAKYAQFE KEKEDESPKL FGVRLEIEGE RDRKRRRAEI SESASILLSQ SCK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1213217RKRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41690.15e-69HSF family protein