PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021282776.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

MYB_related

Protein Properties

Length: 95aa MW: 11156.3 Da PI: 10.5882

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021282776.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.8	5.2e-18	5	50	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +WT+eEd ll+++++q+G g W++++ g++R++k+c++rw++yl XP_021282776.1 5 AWTEEEDHLLKKCIEQYGEGKWHRVPLLAGLNRCRKSCRLRWLNYL 50 7********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 95 aa Download sequence
MGGVAWTEEE DHLLKKCIEQ YGEGKWHRVP LLAGLNRCRK SCRLRWLNYL RPNIKRGSFA 60 KEEVHLIIKL HKLLGNRQVI FSVALSLCNM IKLRM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66370.1	1e-36	MYB family protein