PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021282849.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family NF-YB
Protein Properties Length: 144aa    MW: 15978.7 Da    PI: 4.7515
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021282849.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB161.11.6e-50398297
           NF-YB  2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97
                     eqdr+lPianv+rimk++lP  ak+sk+ak+t+qec++ef+sfvt+easdkc++e+rkt+ngdd++wal+ lGf++y+e++  yl+kyre+e+ek
  XP_021282849.1  3 DEQDRLLPIANVGRIMKQILPPSAKLSKEAKQTMQECATEFVSFVTGEASDKCHKENRKTVNGDDICWALSALGFDNYAEAIVRYLHKYREAEREK 98
                    69*******************************************************************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    
MVDEQDRLLP IANVGRIMKQ ILPPSAKLSK EAKQTMQECA TEFVSFVTGE ASDKCHKENR  60
KTVNGDDICW ALSALGFDNY AEAIVRYLHK YREAEREKGS QNKATSSQDK DEESSEDKNG  120
QPAQQTEAPP TPVTMGDKSV TEPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09030.17e-59NF-YB family protein