PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021283424.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family HB-other
Protein Properties Length: 161aa    MW: 18427 Da    PI: 8.5031
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021283424.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.91.2e-202879556
                    SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox  5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                    +++t++q+++Le++F+++ +p++++r+eL+k+lgL+ +q+k+WFqN+R++ k
  XP_021283424.1 28 HRHTTHQIQTLEAFFKSCAHPDENQRRELSKELGLEPKQIKFWFQNKRTQTK 79
                    679*********************************************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    
MDIASGNIGS SDDEQKASTC HEKGRIYHRH TTHQIQTLEA FFKSCAHPDE NQRRELSKEL  60
GLEPKQIKFW FQNKRTQTKA RKERAENSIL RASKESLLYE NLAMREALAK TVCVCCGSPL  120
LPEPQAGHGL HQLALENTQV KQELEKLTKL LANYINMHVH H
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05230.43e-42HD-ZIP family protein