PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021284156.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 235aa    MW: 25383.3 Da    PI: 4.7228
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021284156.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.54e-194089255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                     ykGVr++  +g+WvAeIr+p   + r +r +lg+f+t  eAa a++aa++kl+g
  XP_021284156.1 40 TYKGVRQRT-WGKWVAEIREP---N-RgARLWLGTFDTSHEAAMAYDAAARKLYG 89
                    69****999.**********8...3.35************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MSTSLMGGFG ERKQIKKPAQ ASSRKGCMRG KGGPENALCT YKGVRQRTWG KWVAEIREPN  60
RGARLWLGTF DTSHEAAMAY DAAARKLYGS DAKLNLPELC VNPQNPPSSA NTPIAPIGNQ  120
PQSVNNSGTS SSNSQIIMAN DVKPVYNNDS VMSFPNENIG SQGNLAENNA KFGQNEDGID  180
GFWENMSVNL PVLDDTIWTE AAMSLDFPVM DDPGSFAGTV VDATGWDALQ SPWCM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.11e-55ERF family protein