PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021284653.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family LBD
Protein Properties Length: 151aa    MW: 17022.2 Da    PI: 6.8943
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021284653.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260129.71.3e-4051041100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +C+aC++lrr+C++dC+++pyfp+++p++f  +h+++Gasnv kll++lp++ r +a++sl++eA++r++dPvyG+vg+i+ lqqql++++++la
  XP_021284653.1   5 RCSACRYLRRRCPPDCIFSPYFPSNNPQRFVSIHRIYGASNVAKLLQQLPTHLRAEAADSLYFEAQCRVEDPVYGCVGLIFLLQQQLHNAESQLA 99 
                     6********************************************************************************************** PP

          DUF260  96 llkee 100
                     ++++e
  XP_021284653.1 100 KTQAE 104
                     *9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    
MNSGRCSACR YLRRRCPPDC IFSPYFPSNN PQRFVSIHRI YGASNVAKLL QQLPTHLRAE  60
AADSLYFEAQ CRVEDPVYGC VGLIFLLQQQ LHNAESQLAK TQAEIAVLKS QAQHPQTQQV  120
EAEPEFNNFL QQQLDNAADL NFSNQGSSGF M
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26660.19e-57LBD family protein