PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021284655.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family MYB_related
Protein Properties Length: 143aa    MW: 16798.3 Da    PI: 5.7663
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021284655.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.81.1e-0785124445
                      S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                      +T++E++l ++  ++ G + W++Ia +++  Rt++++  +w 
   XP_021284655.1  85 MTEQEEDLVYRIYRLVGDR-WDLIAGRIP-ERTAEEIERFWI 124
                      7****************99.*********.*********995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    
MSMIISTLGS GVFQGNPLSQ KKEHSTEWKI TTSQPVLPHR QLECIALFST ICCVEKMDER  60
PQKQAKILKS TSEEVSSIEW EFIKMTEQEE DLVYRIYRLV GDRWDLIAGR IPERTAEEIE  120
RFWIMRHGEM FADKRNEEKA KFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53200.14e-37MYB_related family protein