PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021284675.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family MYB_related
Protein Properties Length: 81aa    MW: 9351.46 Da    PI: 9.4291
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021284675.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.12e-081053344
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                      WT+   +l+ +a + + ++   +W ++a+ +g  +++++++ ++
   XP_021284675.1 10 YWTPKQNKLFEKALAVYDKDtpdRWQKVAAAVG-EKSAEEVRRHY 53
                     5********************************.9*********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 81 aa     Download sequence    
MTSSRDSNSY WTPKQNKLFE KALAVYDKDT PDRWQKVAAA VGEKSAEEVR RHYEILVADL  60
MYIESGQVPI PNYRSTGSNR R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.21e-35MYB_related family protein