PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021284678.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family MYB_related
Protein Properties Length: 86aa    MW: 10452.9 Da    PI: 4.9858
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021284678.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.33.5e-082867445
                     S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                     +T++E++l ++  ++ G + W++Ia +++  Rt++++  +w 
   XP_021284678.1 28 MTEQEEDLVYRIYRLVGDR-WDLIAGRIP-ERTAEEIERFWI 67
                     7****************99.*********.*********995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 86 aa     Download sequence    
MDERPQKQAK ILKSTSEVSS IEWEFIKMTE QEEDLVYRIY RLVGDRWDLI AGRIPERTAE  60
EIERFWIMRH GEMFADKRNE EKAKFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53200.19e-36MYB_related family protein