PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021284770.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family MYB_related
Protein Properties Length: 93aa    MW: 10680.1 Da    PI: 8.8545
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021284770.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.53.6e-09652347
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47
                      WT+   +l+ +a + + ++   +W+  ar +g g+t +++k ++ ++
   XP_021284770.1  6 TWTPKQNKLFENALAIYDKDtpdRWHNLARAVG-GKTVEEVKMHYENL 52
                     7********************************.***********997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 93 aa     Download sequence    
MASGSTWTPK QNKLFENALA IYDKDTPDRW HNLARAVGGK TVEEVKMHYE NLVEDVKQIE  60
SGHVPLPPYK KAGGSKGYSY MDEEQRMRNL RLQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39250.15e-39MYB_related family protein