PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021284916.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 217aa    MW: 23808.8 Da    PI: 5.7972
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021284916.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.41.7e-183181155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++ykGVr ++ +g+Wv+eIr p   ++++r++lg++ t+e Aa+a++aa ++l+g
  XP_021284916.1 31 KKYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTPEAAARAYDAALLCLKG 81
                    59*****998.**********9...336************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MVKTEHKIQP EPSKQMTSST SPTSPSSCKK KKYKGVRMRS WGSWVSEIRA PNQKTRIWLG  60
SYSTPEAAAR AYDAALLCLK GSSANLNFPI TSSQYIPDTV MSPKSIQRVA AAAANSFVDK  120
ATTPPISPSP PSISSSSSVS SPSMSSSPSD QVDDDVSLMQ SLVANDEPIS MMEPWYSLDS  180
LHSPKYIDQM FNLASFDPPT MIDDFYEEGD IRLWSFC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.12e-38ERF family protein